On this CD Mx is stored in the Software\Mx\ directory. The Windows version can be installed by running Software\Mx\MxGUI\Windows\SETUP.EXE. Binaries for various Unix and Unix-like systems are in Mx/Unix-standalone.
Shaun Purcell's software.
Gonçalo Abecasis' software is available from his homepage. It is also available on this CD.
ViewPoint from the Queensland Institute of Medical Research. ViewPoint is distributed as two Java programs.